YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|192929229, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSFIAFSKN STHFKGIFAM RIILLGAPGA GKGTQAQFIM EKYGIPQIST GDMLRAAVKS  60
   61 GSELGKQAKD IMDAGKLVTD ELVIALVKER IAQEDCRNGF LLDGFPRTIP QADAMKEAGI 120
  121 NVDYVLEFDV PDELIVDRIV GRRVHAPSGR VYHVKFNPPK VEGKDDVTGE ELTTRKDDQE 180
  181 ETVRKRLVEY HQMTAPLIGY YSKEAEAGNT KYAKVDGTKP VAEVRADLEK ILG

Type	Start	End	Confidence
Signal Peptide	1	36	0.75
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	233	0.99