YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1773143
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTISSLSRS TNIWMTPLCC SVVMVLICRI FRNGGSQVID YSVVLSMRRK RILRVYLVRI  60
   61 ITTIGRSMSE KPLTKTDYLM RLRRCQTIDT LERVIEKNKY ELSDNELAVF YSAADHRLAE 120
  121 LTMNKLYDKI PSSVWKFIR

Type	Start	End	Confidence
Cytoplasmic	1	10	0.48
Transmembrane Helix	11	31	0.59
Non-Cytoplasmic	32	139	0.83