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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ANX2_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.78
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEKLRILFS FLCFFYVLLV SPSQSNGQDI SLSCGASEPA VDQDKKKWEP DTKFLKTPNT  60
   61 VHAPATYQDP SLLSTVPYMT SRIFTAPATY EIPVKGDKRH MLRLHFYPST YTGLNILDSY 120
  121 FSVAANDLTL LSNFSAAITC QALTQAYLVR EYSLAPSEKD VLSIIFTPSD KHPKAFAFIN 180
  181 GIEVIPMPEL FDTASLVGFS DQTSDTKTAN LQTMFRLNVG GQDIPGSQDS GGLTRTWYND 240
  241 APYIFSAGLG VTLQASNNFR IDYQKMPVST APADVYKTAR SQGPNGDINM KSNLTWMFQV 300
  301 DTNFTYIMRL HFCEFQLAKI NQKVFNIFIN NRTAQGDTNP ADILGWTGGK GIPTYKDYAI 360
  361 YVDANTGGGG EEISLQMTPS TFGQPEYYDS QLNGLEIFKI DTMKNLAGPN PKPSPMQANE 420
  421 DVKKDFQGDK RITAFVIGSA GGVAAVLFCA LCFTMYQRKR KFSGSDSHTS SWLPIYGNSH 480
  481 TSATKSTISG KSNNGSHLSN LAAGLCRRFS LSEIKHGTHN FDESNVIGVG GFGKVYKGVI 540
  541 DGGTKVAIKK SNPNSEQGLN EFETEIELLS RLRHKHLVSL IGYCDEGGEM CLIYDYMSLG 600
  601 TLREHLYNTK RPQLTWKRRL EIAIGAARGL HYLHTGAKYT IIHRDVKTTN ILLDENWVAK 660
  661 VSDFGLSKTG PNMNGGHVTT VVKGSFGYLD PEYFRRQQLT EKSDVYSFGV VLFEVLCARP 720
  721 ALNPSLSKEQ VSLGDWAMNC KRKGTLEDII DPNLKGKINP ECLKKFADTA EKCLSDSGLD 780
  781 RPTMGDVLWN LEFALQLQET ADGSRHRTPS NGGGSVDLGG GGGGVTVNIS AGESDLGDDL 840
  841 SSEENSGIFS QIVNPKGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle