YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15241811
Protein type:	Transmembrane
Type Confidence:	0.51
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACLQLIANV FFSSSARLSR RSQDKPFSNL YPRSLVRSSE LALQLVSKII WLRVPLAGVR  60
   61 SRARSNGRKG RAPDIIKPGS VNTDPVFPNN KLTGTDIGYP GGLWFDPLGW GSGSPTKIKE 120
  121 LRTKEIKNGR LAMLAVMGAW FQHIYTGTGP IDNLFAHLAD PGHATIFAAF TPK

Type	Start	End	Confidence
Cytoplasmic	1	127	0.49
Transmembrane Helix	128	145	0.47
Non-Cytoplasmic	146	173	0.89