YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15241769
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKINGEKN RIKRVYRETR KEQRFERQMQ QNRGQTGVDN QDLKSNIVVV EVSPSPTLAQ  60
   61 ASLKMSQILP SVYLSTFSVA SLLPVVLVLL DYFVNQSAST SGYDDPDLNQ YQSKKRIGIV 120
  121 GLGSIGSKVA TRLKAFGCQI SYSSRNRKPY AVPYHYYMDI EEMHGVIVNV ALGAIIDEEE 180
  181 MSNVPKELFE LDNVVFSPHC AFMTLEGLEE LGKVVVGNIE AFFSNKPLLT PVL

Type	Start	End	Confidence
Cytoplasmic	1	71	0.77
Transmembrane Helix	72	93	0.75
Non-Cytoplasmic	94	233	0.93