YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PME52_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPCLFIFIAL LLSSCIGTLK ALDQTCGNKV VNTIVVDQAG SGEGQRVTTI TYNGHAATDV  60
   61 SSTFTSYPSH IVVRNLSIMN TYNRLTSLTK ANGMSWDIKP AVAISVYGDK SAFYNCDFLG 120
  121 LQDTVWDNLG RHHFKNCYIE GAIDFIFGSG QSVYEDCHIN ATAGALASKV SFGYITAQGR 180
  181 SSDSDPSGFV FLRGSVSGST SVYLGRAYGP FSRVIFIQTD LSSVVHPEGW YSWHYGGYEM 240
  241 SFTYAEVECK GAGSDMSRRV PWIDKLHSFY TKQQFSISNF IDQDQWISNI PRF

Type	Start	End	Confidence
Signal Peptide	1	21	0.92
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	293	0.99