YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15242107
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANFGIERVY QEFEPATRWT SEPDAEVLVA DLPGFKKEQL KVSVTATRKL RLTGERPTGG  60
   61 NKWIRFHQEI PVPLTVDIDS VSAMFKDNKL YIRHPKLKTE IPQTKPPTPV IMKPHDQHER 120
  121 KQGQGPKAMV EKPSGGKTDQ LKHDAQQLKH DAQQLKHDAQ QKAREVVQSG KNKLTGEPKG 180
  181 PLSSKDDEKD KVGAKWFEKY KEATGNVVKE AKNKRQLLCN LAASVSLVLL ILLYARNAVR 240
  241 SSLVWKSEE

Type	Start	End	Confidence
Cytoplasmic	1	216	0.73
Transmembrane Helix	217	235	0.81
Non-Cytoplasmic	236	249	0.82