YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME54_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVIDMVLFW VLLVNALLIV DASSRNMPFA YQNEMQRHCS STKYTSLCVQ NLREFRHGSL  60
   61 DGLDFVSFLV NKTISDSNLL IPPLSSSMGS SKLVSLEDST YTLPSPSVSD SCERLMKMST 120
  121 RRLRQAMEAL NGSSRKRHTK HDVQTWLSAA MTFQQACKDS ILDSGGSSSA SAISHISQKM 180
  181 DHLSRLVSNS LTLVDTIMKN PKPKTKSTAL PRWVTAGERR LLVGRARAHV VVAKDGSGDY 240
  241 RTVMEAVTAA HGNGKDLTVI VGDDSATGGT SVPDTATMTV TGDGFIARDI GIKNIAGPRG 300
  301 HQAIALSITS DQSVLYRCSI SGYQDTLYAA ALRQFYRECD IYGTIDFIFG NAAAVFQSCN 360
  361 IFLRRPHGVK AYNVILANGR TDQRQNTGFA LHSCRIRTDS DLSPVKHKYS SYLGRPWRKY 420
  421 SRAIVMESYI DDAIAEGGWA GWLDSGDEVL KTLYFGEFKN YGPKARISKR VTWEGFHSIG 480
  481 FEEANYFSVV KRRNGEDVTN GFKYKFKIKI QI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle