YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67633812, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDYSKNLFL LLFSCTALII SYYNVDSLST ASVVGLNYGL LGDNLPSPSN VIKFYKSQNV  60
   61 AKIRIFEPNK DVLNALRGNR DIGVTVGIKN EDLEALAANK DAVKSWFSTN IDPYIADVNI 120
  121 TFITVGNQAI PGDKHGPHVL PVIQSLTDLV KSRNLQISIS TTVTTTSLAR LKPPSAGVLT 180
  181 PQARQQLVPV LRLLSQTSTP IFVNIYPYYF HASDPKNVPL EYANFNNDQI VVKDGALKYS 240
  241 NLFDAIFDAF LWAMEKEGVK GLPLVVSETG WPSAGNGGMT TPALQYTYIG NFVKHVASGK 300
  301 GTPKRPNSRI DAYIFETYNE NQKPVGIYQH FGLYDPY

Type	Start	End	Confidence
Signal Peptide	1	21	0.51
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	337	0.97