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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15241358
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQDMVLLVR EPKPEFRLCL YIVFDFIQIL IFFFCLMFIQ TWLHSEQEAA KDLRKALSEA  60
   61 EARNLELATE LETVTRKLDQ LQESVQRFNE YLNMSLKMAA RDTGALREAK DKLEKRVEEL 120
  121 TLRLQLETRQ RTDLEEAKTQ EYAKQQEALQ AMWLQVEEAN AVVVREREAA RKAIEEAPPV 180
  181 IKEIPVLVED TEKINSLTSE VEALKAERQA AEHLEKAFSE TEARNSELAT ELENATRKAD 240
  241 QLHESVQRLE EKLSNSESEI QVLRQQALAI SGETKTTPED ILVKCISQNL GYNGDMPVAA 300
  301 CVIYKCLLHW RSFELERTSV FDRIIETIGS AVEVLEDNEV LAYWLSNLAS LSLFLEQIIN 360
  361 AARSASTNDI NGKFGERKST RKCCSDCTLG KYQEKPKHNG EYVKAGLAEL EQWCIEATDE 420
  421 YAGSAWDELR HIRQAVGFLV TYQKPKMSLA VITSFFPVLS IQQLYRISTN YWDEKYGTHS 480
  481 VSSDVIANMR VMMTEDSNNA VSSSFLLDED DSIPFTVGDI TESMEQVNVN DIELPQLIRE 540
  541 NSSFSFLLTR KEASPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle