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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|221322086
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEELKVFKK VEVAMKKLFS YKLSFFVLAV ILFWAKTYLS YKTEFNLGVK GTTQEILLIF  60
   61 NPFSSAVFFL GLALLAKGRK SAIIMLIIDF LMTFVLYANI LFYRFFDDFL TFPNIKQSGN 120
  121 VGNMGDGIFS IMAGHDIFYF LDIIILIAVL IWRPELKEYK MKKRFASLVI LSGIALFFIN 180
  181 LHYAEKDRPQ LLTRTFDRNY IVKYLGLYNY TIYDGVQTAQ TETQRAYASS DDLTSVENYT 240
  241 TSHYAKPNAE YFGSAKGKNI IKIHLESFQS FLIDYKLNGE EVTPFLNKLA HGGEDVTYFD 300
  301 NFFHQTGQGK TSDAELTMDN SIFGLPEGSA FVTKGENTYQ SLPAILDQKE GYTSAVLHGD 360
  361 YKSFWNRDQI YKHIGYDKFF DASTYDMSDE NVINMGLKDK PFFTESIPKL ESLKQPFYAH 420
  421 LITLTNHYPF NLDEKDASLK KATTGDNTVD SYFQTARYLD EALEQFFKEL KEAGLYDNSV 480
  481 IMIYGDHNGI SENHNRAMKE ILGKEITDYQ NAQNQRVPLM IRVPGKKGGV NHTYGGEIDV 540
  541 MPTLLHLEGI DSQKYINFGT DLFSKDHDDT VAFRNGDFVT PKYTSVDNII YDTKTGEKLK 600
  601 ANEETKNLKT RVNQQLSLSD SVLYKDLLRF HKLNDFKAVD PSDYHYGKEK EIK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle