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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT61_ARATH
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLGEASSY PYRSCIIVVF LSVSLFWLRP STYHPQQQNL NPENVTRLES ENETKTNYII  60
   61 RFKQYKPAKD HRIYLESKVR SGGWGWIERI NPATKYPTDF GVLWIEESGK EAVVGEIERL 120
  121 EMVKDVNVEF KYQRVLLGGS FPDGKKRPGK IFTSMSFEEG TESSPMADTS NTTLNWSRHL 180
  181 LAQKTQVTSM FGADHLWKKG YTGAKVKMAI FDTGIRADHP HFRKIKERTN WTNEDTLNDN 240
  241 LGHGTFVAGV IAGRNPECLG FASDTEIYAF RVFTDAQVSY TSWFLDAFNY AIATDMDVLN 300
  301 LSIGGPDYLD LPFVEKVWEI TASNIIMVSA IGNDGPLYGT LNNPADQSDV IGVGGIDNDD 360
  361 HIASFSSRGM STWELPHGYG RVKPDVVAYG RDIMGSKIST GCKSLSGTSV ASPVVAGIVC 420
  421 LLVSVIPEAR RKDLLNPASM KQALVEGAAK LSGPNMYEQG AGRVDLLESY EILKSYHPRA 480
  481 SIFPSILDYN DCPYSWPFCR QPLYAGAMPI IFNTTILNGM GVIGYIESPP TWHPANEEGN 540
  541 LLSIHFKYPD VIWPWTGYLA LHMQIKEEGA QFTGEIEGNV TVKVYSPPAS GESGPRRSTC 600
  601 SLQLKLKVIP TPPRAKRILW DQFHSIKYPP GYIPRDSLDV RNDILDWHGD HLHTNFHIMY 660
  661 NMLRDAGYYI ETLGSPLTCF DAQQYGTLLM VDLEDDYFPE EIEKLRDDVI NTGLGLVVFA 720
  721 EWYNVDTMVK MRFFDDNTRS WWTPVTGGAN IPALNNLLAS FGIAFGDKIL NGDFSIDGEQ 780
  781 SRYASGTNIV RFPAGGFLHT FPLLDSSESG ATQNLLLTEA SKEDPAVLGL LEIGEGRVGV 840
  841 YGDSNCLDSS HMVTNCYWLL KKMLDFSSSN IKDPVLFSKF AKRYSPVIID EKQLPSRRTD 900
  901 VNFSTYSSVI GKELICESDS RFEVWGTKGY NLHVRGRNRR LPGYHGIDLG RGLNFTVESK 960
  961 RPTRWRSAKE GGELSSSRSK SLGGLFNRDE IDMPFLVPTR WIVLAGVVAS GVLVLLSIWR1020
 1021 IRQKRGRRRR ASGSNRLA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle