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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7439967, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQAASSAS EGGSPAAAAA AAAAAASSFP ATSLYVGDLD VSVQDAQLFD VFAQIGGVVS  60
   61 VRVCRDVTSR KSLGYAYVNY NTPADAARAL EMLNFTPING RPIRIMYSNR DPSLRKSGTA 120
  121 NIFIKNLDKS IDNKALYDTF CVFGNILSCK VATDPAGESK GYGFVQYERD EAAHAAIEKL 180
  181 NGMLMNDKKV YVGPFVRKQE RDNSPGNVKF NNVYVKNLAE TTTEDDLKEI FGKFGAITSV 240
  241 VVMRDGDGRS KCFGFVNFES PDEAALAVQD LNGKKFSDKE WYVGRAQKKS EREIELKEKF 300
  301 EKNLQEAADK YQNTNLYLKN LDDTVDDEKL RELFAEFGTI TSCKVMRDSN GASRGSGFVA 360
  361 FKSADDASRA LAEMNNKMVG NKPLYVALAQ RKEDRKARLQ AQFSQMRPVP MAQTVGPRMQ 420
  421 MLPPGVPVGQ QMFYGQPPAF INPQPGFGFQ QPFMPGMRPG GAPMPNFMMP MVQQGQQPQR 480
  481 PAGRRAGAGG MQQSMQMGQQ QMLGRGGGRG YRYQTGRGMP DPAMHGVGGV MTSPYEMGGM 540
  541 PMRDAGESQP VPIGALASAL ANSPPETQRM MLGENLYPLV DQLEHDQAAK VTGMLLEMDQ 600
  601 TEVLHLLESP DALKAKVAEA MEVLRSAQQH TNQSPEQQLA SLSLNDGLIS S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle