YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15238889
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMWLCVIVIL QDMGQKRWFF LLAIFVCLVS SSCGRVLKFK SDDGRPVYNH TLAITLVEYT  60
   61 SAVYMSDLSE LFTWTCERCN GLTKGFEVIE IIVDVEHCLQ AYVGVAKDLN AIIIAFRGTQ 120
  121 EHSIQNWVSD LFWKQLDLNY PDMPDAMVHH GFYSAYHNTT VRPAVLDAVK RAKESYGANL 180
  181 NIMVTGHSMG GAMASFCALD LVVNEGEENV QVMTFGQPRV GNAAFASYFN LLVPNTFRII 240
  241 HDRDIVPHLP PYYHLFPQKT YHHFPTEVWL TELSILNIVI RGVEKVCDNT GEDPTCSRSV 300
  301 MGNSISDHLT YFGVELMGET WRQCNIVMGH EMESYSRKDS KGNIFLSRTV PSTEVIKTKS 360
  361 ISKTGISSL

Type	Start	End	Confidence
Signal Peptide	1	34	0.78
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	369	0.94