YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18412679
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLCWYNYIS RTLPFEAPRE IFHKTKRVKK NGTMIPSPQS GDYRSFFNSS SPLPLIIELV  60
   61 HVQIIKFKDS SQIFKSLKKN GIITAFPWKS GYRSILNLFY PTASSLEFVS KSLYALFARA 120
  121 VYDHPLVEDF AKLVFMVESA IVSTDFSTIA NFLKVNIPLE NSWNLYLSFC CIIVACINFP 180
  181 LLRP

Type	Start	End	Confidence
Cytoplasmic	1	161	0.57
Transmembrane Helix	162	182	0.85
Non-Cytoplasmic	183	184	0.50