YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148709019, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLHYFGFGY AALVATGGII GYAKAGSVPS LAAGLFFGGL AGLGAYQLSQ DPRNVWVFLA  60
   61 TSGTLAGIMG MRFYNSGKFM PAGLIAGASL LMVAKVGISL LSSPHP

Type	Start	End	Confidence
Cytoplasmic	1	5	0.48
Transmembrane Helix	6	25	0.75
Non-Cytoplasmic	26	27	0.34
Transmembrane Helix	28	48	0.81
Cytoplasmic	49	54	0.45
Transmembrane Helix	55	74	0.91
Non-Cytoplasmic	75	79	0.45
Transmembrane Helix	80	102	0.86
Cytoplasmic	103	106	0.48