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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30680681, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRDSVRIVG VLLWMCMWVC CYGDGEYLLY KDPKQTVSDR VADLFGRMTL EEKIGQMVQI  60
   61 DRSVATVNIM RDYFIGSVLS GGGSAPLPEA SAQNWVDMIN EYQKGALVSR LGIPMIYGID 120
  121 AVHGHNNVYN ATIFPHNVGL GATRDPDLVK RIGAATAVEV RATGIPYTFA PCIAVCRDPR 180
  181 WGRCYESYSE DHKVVEDMTD VILGLQGEPP SNYKHGVPFV GGRDKVAACA KHYVGDGGTT 240
  241 RGVNENNTVT DLHGLLSVHM PAYADAVYKG VSTVMVSYSS WNGEKMHANT ELITGYLKGT 300
  301 LKFKGFVISD WQGVDKISTP PHTHYTASVR AAIQAGIDMV MVPFNFTEFV NDLTTLVKNN 360
  361 SIPVTRIDDA VRRILLVKFT MGLFENPLAD YSFSSELGSQ AHRDLAREAV RKSLVLLKNG 420
  421 NKTNPMLPLP RKTSKILVAG THADNLGYQC GGWTITWQGF SGNKNTRGTT LLSAVKSAVD 480
  481 QSTEVVFREN PDAEFIKSNN FAYAIIAVGE PPYAETAGDS DKLTMLDPGP AIISSTCQAV 540
  541 KCVVVVISGR PLVMEPYVAS IDALVAAWLP GTEGQGITDA LFGDHGFSGK LPVTWFRNTE 600
  601 QLPMSYGDTH YDPLFAYGSG LETESVASIV ARSTSASATN TKPCLYTVLV SATLCLFIFP 660
  661 SLSRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle