YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9844612
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FATAVSRPGR GDSRYISVGY VDDTQFVRFD SDAASPRMEP RAPWVEREGP EYWDRETRIS  60
   61 KDNAQNDRVN LRNLRGYYNQ SDAGSHTLQR MSGCDVGPDG RLLRGYWQYA YDGADYLALN 120
  121 EDLRSWTAAD TAAQISKRKF ETAGAAEHSR AYVEGRCLDW LRRYLEHGKD TLLRAEPPRT 180
  181 HVTHHPSSEH KATLRCWALG FYPAEITLTW QRDGQDLTQD MEFVETRPAG DGTFQKWAAV 240
  241 VVPPGEEQRY TCHVQHEGLP EPLTLRWEPP SQPSIPMLGI IAGLVVLGAV LIGAVVATVM 300
  301 WRKKSSGGKG GSYTQAACSD SAQGSDVSLT ACKA

Type	Start	End	Confidence
Non-Cytoplasmic	1	276	0.97
Transmembrane Helix	277	299	0.94
Cytoplasmic	300	334	0.96