YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42572961
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIQARPLVF INHGESDQSD GFIRHVERAL NDEGFNVFID SDERRGRGME HIFRAIDNSN  60
   61 VALVIFSDRY TASELCLHEA VRIYDRRREG KLVLIPVFYR VSEDDVNMFN GRFGESFLET 120
  121 LTIQGFRDHP FAEHWMRNVN FICTDTGFTS ADYSSNDTSL VEEIVRAIKR RLQGKKLPRR 180
  181 VQDEKLPSPL DMFMPKQPNA QEGFGKELLY VAIAALLCYF IIPFVFTDWM SSVSFSGSLL 240
  241 F

Type	Start	End	Confidence
Cytoplasmic	1	207	0.89
Transmembrane Helix	208	227	0.93
Non-Cytoplasmic	228	241	0.80