YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22329270
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKRIYMIGR FLSIINVFLK FSNRTVKLSG SVLTEILESS SSSVKKKPEF LQRFENRLHF  60
   61 LDMDWQGQKL AEQLMQILLL IAAVVSFVVG YTTASFRMMM LIYAGGVVLT TLITIPNWPC 120
  121 FNRHHLKWLD PSEAEKHPKP QVVVVSSKKK SSSKK

Type	Start	End	Confidence
Cytoplasmic	1	73	0.92
Transmembrane Helix	74	94	0.92
Non-Cytoplasmic	95	99	0.78
Transmembrane Helix	100	121	0.90
Cytoplasmic	122	155	0.93