YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RR10_MESCR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSSLSTIV FSPLALSNSS SFPNKPQVSN LSLHSSLSNL RRTLSHSSPS SSSSSNVRVF  60
   61 AAPEVLESQE TGPESYVEEG SETSALGIGA DSDQMAPKQK IRIKLRSYWV PLIEDSCKQI 120
  121 MDAARTTNAK TMGPVPLPTK KRIFCVLKSP HVHKDARFHF EIRTHQRLID ILYPTAQTID 180
  181 SLMQLDLPAG VDVEVKL

Type	Start	End	Confidence
Signal Peptide	1	21	0.95
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	197	0.99