YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RK19_SPIOL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKVLPQAL LVIPSNHSLQ CPPLKKQLGF PIDSNRRFSL SSNCRSNLMV SRASSNLFSS  60
   61 NFSSIFSFPA RNSFVVRSEA EDSSDAPAES VAVVAEEELP VESEAEAEER PPRQQRVKLG 120
  121 DIMGILNKKA VHAAEELRPV PGIRTGDIVQ IRLEVPENKR RLSVYKGIVI SRQNAGIHTT 180
  181 IRIRRIIAGV GVEIVFPLYS PNIKEIKVVS HRKVRKARLY YLRDKLPRLS TFK

Type	Start	End	Confidence
Signal Peptide	1	18	0.64
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	233	0.98