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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NDB1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLLSSLGRA SRSAPLASKL LLLGTLSGGS IVAYADANEE ANKKEEHKKK KVVVLGTGWA  60
   61 GISFLKDLDI TSYDVQVVSP QNYFAFTPLL PSVTCGTVEA RSIVESVRNI TKKKNGEIEL 120
  121 WEADCFKIDH VNQKVHCRPV FKDDPEASQE FSLGYDYLIV AVGAQVNTFG TPGVLENCHF 180
  181 LKEVEDAQRI RRGVIDCFEK AILPGLTEEQ RRRKLHFVIV GGGPTGVEFA AELHDFIIED 240
  241 ITKIYPSVKE LVKITLIQSG DHILNTFDER ISSFAEQKFT RDGIDVQTGM RVMSVTDKDI 300
  301 TVKVKSSGEL VSIPHGLILW STGVGTRPVI SDFMEQVGQG GRRAVATNEW LQVTGCENVY 360
  361 AVGDCASIAQ RKILGDIANI FKAADADNSG TLTMEELEGV VDDIIVRYPQ VELYLKSKHM 420
  421 RHINDLLADS EGNARKEVDI EAFKLALSEA DSQMKTLPAT AQVAAQQGAY LAKCFNRMEQ 480
  481 CKELPEGPKR FRTGGHHQFR PFQYKHFGQF APLGGDQAAA ELPGDWVSAG KSAQWLWYSV 540
  541 YASKQVSWRT RALVVSDWTR RYIFGRDSSR I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle