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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42567017
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENSFLSSKL VFLLAIALVL FLNTELSFLT AEGASDSNSK VYIVYLGQRE HDDPELLTAS  60
   61 HHQMLESLLQ SKEDAHNSMI YSYQHGFSGF AALLTSSQAK KISEHPEVIH VIPNRILKLK 120
  121 TTRIWDHLGL SPIPTSFSSS SSAKAKGLLH NTSMGSEAII GVVDSGIWPE SKVFNDQGLG 180
  181 PIPKRWRGKC RSGEKFNATM HCNKKLIGAK YYQSGLLAMN GGKFNRIIIR DFKSNRDATG 240
  241 HGTHTATIAG GSFVPNASFY GLARGTVRGG APRARIASYK ACWNVVGWGG ICSSADMWKA 300
  301 YDDAIHDQVD VLSVSIGASI PEDSERVDFI AAFHAVAKGI TVVAAAGNDG SGAQTICNVA 360
  361 PWLLTVAATT LDRSFPTKIT LGNNQTFFGK TILEFDSTHP SSIAGRGVVA VILAKKPDDR 420
  421 PAPDNSYIFT DYEIGTHILQ YIRTTRSPTV RISAATTLTG QPATPKVAAF SSRGPNSVSP 480
  481 AILKPDIAAP GVSILAAVSP LDPGAFNGFK LHSGTSMSTP VVSGIIVLLK SLHPKWSPAA 540
  541 MRSALVTTAW RTSPSGEPIF AQGSNKKLAD PFDYGGGLVN PEKAAKPGLV YDMGIKDYIN 600
  601 YMCSAGYNDS SISRVLGKKT KCPIPKPSML DINLPSITIP NLEKEVTLTR TVTNVGPIKS 660
  661 VYRAVIESPL GITLTVNPTI LVFKSAAKRV LTFSVKAKTS HKVNSGYFFG SLTWTDGVHD 720
  721 VTIPVSVKTT ISM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle