YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30679394
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMKSLHLLS SSILLHRFAS RSIASLSTLP RRRNIVRIHN PSFSSPFPPI LSRPISSGKV  60
   61 LAMAEESSSS STSSTSQKHT NRLAAEHSPY LLQHAHNPVD WYPWGEEAFE EARKRDVPIF 120
  121 LSIGYSTCHW CHVMEVESFE DEEVAKLLNN SFVSIKVDRE ERPDVDKVYM SFVQALYGGG 180
  181 GWPLSVFLSP DLKPLMGGTY FPPNDNYGRP GFKTLLKKVK DAWNSKRDTL VKSGTYAIEE 240
  241 LSKALSASTG ADKLSDGISR EAVSTCAKQL SRSYDSEFGG FGSAPKFPRP VEIQLMLYHY 300
  301 KKLKESGKTS EADEEKSMVL FSLQGMANGG MHDHIGGGFH RYSVDECWHV PHFEKMLYDQ 360
  361 GQLANVYLDG FSITKDVMYS YVARDILDYL RRDMIAPEGG IFSAEDADSF EFEGAKRKKE 420
  421 GAFYIWTSDE IDEVLGENAD LFKEHYYVKK SGNCDLSSRS DPHNEFAGKN VLIERNETSA 480
  481 MASKFSLSVE KYQEILGECR RKLFDVRLKR PKPHLDDKII VSWNGLVISS FARASKILKA 540
  541 EPESTKYYFP VVNSQPEDYI EVAEKAALFI RGNLYDEQSR RLQHSYRQGP SKAPAFLDDY 600
  601 AFLISGLLDL YENGGGIEWL KWAIKLQETQ DELYLDREGG AYFNTEGQDP SVLLRVKEDH 660
  661 DGAEPSGNSV SAINLVRLAS IVAGEKAESY LNTAHRLLAV FELRLRELAV AVPLMCCSAD 720
  721 MISVPSRKQV VLVGSKSSPE LTNMLSAAHS VYDPNKTVIH IDPSSSDEIE FWEEHNSNVA 780
  781 EMAKKNRNSE KVVALVCQHF TCSPPVFDSS SLTRLLSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle