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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT4E_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRSKCSCHH HLLVLVMVVL WISPRYASAE DEHAKDFYII YLGDRPDNTE ETIKTHINLL  60
   61 SSLNISQEEA KERKVYSYTK AFNAFAAKLS PHEAKKMMEM EEVVSVSRNQ YRKLHTTKSW 120
  121 DFVGLPLTAK RHLKAERDVI IGVLDTGITP DSESFLDHGL GPPPAKWKGS CGPYKNFTGC 180
  181 NNKIIGAKYF KHDGNVPAGE VRSPIDIDGH GTHTSSTVAG VLVANASLYG IANGTARGAV 240
  241 PSARLAMYKV CWARSGCADM DILAGFEAAI HDGVEIISIS IGGPIADYSS DSISVGSFHA 300
  301 MRKGILTVAS AGNDGPSSGT VTNHEPWILT VAASGIDRTF KSKIDLGNGK SFSGMGISMF 360
  361 SPKAKSYPLV SGVDAAKNTD DKYLARYCFS DSLDRKKVKG KVMVCRMGGG GVESTIKSYG 420
  421 GAGAIIVSDQ YLDNAQIFMA PATSVNSSVG DIIYRYINST RSASAVIQKT RQVTIPAPFV 480
  481 ASFSSRGPNP GSIRLLKPDI AAPGIDILAA FTLKRSLTGL DGDTQFSKFT ILSGTSMACP 540
  541 HVAGVAAYVK SFHPDWTPAA IKSAIITSAK PISRRVNKDA EFAYGGGQIN PRRAASPGLV 600
  601 YDMDDISYVQ FLCGEGYNAT TLAPLVGTRS VSCSSIVPGL GHDSLNYPTI QLTLRSAKTS 660
  661 TLAVFRRRVT NVGPPSSVYT ATVRAPKGVE ITVEPQSLSF SKASQKRSFK VVVKAKQMTP 720
  721 GKIVSGLLVW KSPRHSVRSP IVIYSPTSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle