YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14250902
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTRFRNKRR TWPLIAIVFI VLMFSLLRAK LLLQADTPGG AAEREANPKY LSTDTLIIVP  60
   61 GHGVLNAPNA SEWKNESEWC LEPHQLRAGV VLPLCFASHV RRGLEILRDQ INTSILIFSG 120
  121 GQTCGIAGPR SEALGYYIVA KESKLFGIFE PEYVAKDIMN GRIFTEEFAR DSYENLLFSI 180
  181 ARFYEVTGHF PGSVVVVGWK HKAERFTMYH REAIRFPADK FTYVGLDFAD AEPFVEDLQP 240
  241 YQVAKPYTDE NALSSVSKDM YLCDAGRRTR SKRNPYFRVP PYLVSCPPLR QLLQHCGPEL 300
  301 IDTRRVPWK

Type	Start	End	Confidence
Signal Peptide	1	29	0.95
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	309	0.99