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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK41_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSCSLSRP QHLFFFFFLF VPFLSLGQQI SVDINSAIWE FPSNPLCLSQ QSNFAKSSQF  60
   61 SKNLDSLVSS IPSLKSNTYN FYSLSVGSIS DQERVEAIGI CNRVVNRVDC LNCIAQAAVN 120
  121 LTTMYCPQHR GAYVRATKCM FRYSDKPIFG KLETSPVLEA PNPSNATGDR NEFIRLQSEL 180
  181 LNRLRSMAAS GGSKRKYAQG TDPGSPPYTT FFGAVQCTPD LSEKDCNDCL SYGFSNATKG 240
  241 RVGIRWFCPS CNFQIESDLR FFLLDSEYEP DPKPGNDKVK IIIATVCSVI GFAIIAVFLY 300
  301 FFMTRNRRTA KQRHEGKDLE ELMIKDAQLL QLDFDTIRLA TNDFSRDNQL GEGGFGAVYK 360
  361 GVLDYGEEIA VKRLSMKSGQ GDNEFINEVS LVAKLQHRNL VRLLGFCLQG EERILIYEFF 420
  421 KNTSLDHYIF DSNRRMILDW ETRYRIISGV ARGLLYLHED SRFKIVHRDM KASNVLLDDA 480
  481 MNPKIADFGM AKLFDTDQTS QTRFTSKVAG TYGYMAPEYA MSGEFSVKTD VFSFGVLVLE 540
  541 IIKGKKNNWS PEEDSSLFLL SYVWKSWREG EVLNIVDPSL VETIGVSDEI MKCIHIGLLC 600
  601 VQENAESRPT MASVVVMLNA NSFTLPRPSQ PAFYSGDGES LSRDKNQINH IASLNDVTIT 660
  661 EFDAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle