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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK27_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTSIMLSS FFSFFFLTFF VTYAQQNVTV HTICYYDGGN FTSNTSYSLN LNRLISSLPD  60
   61 LTPTINGFYN ISINGEVNAI ALCRGDVKPN QDCISCITTA AKQLVESCPN IIEANIWLEK 120
  121 CMFRYTSRII LGQMEPVPFS YTSSNVSVTD KEGFSKGLGD LLDSLGAKID AANETKEVKF 180
  181 AAGVKGTIYA LAQCTPDLSE SDCRICLAQI FAGVPTCCDG KTGGWWTNPS CYFRFEVYPF 240
  241 FDLSVTSEQK QPLSSHNNNT RRSDQGKSKD RSKTLIFAVV PIVAIILGLV FLFIYLKRRR 300
  301 KKKTLKENAE NEFESTDSLH FDFETIRVAT DDFSLTNKIG EGGFGVVYKG HLPDGLEIAV 360
  361 KRLSIHSGQG NAEFKTEVLL MTKLQHKNLV KLFGFSIKES ERLLVYEFIP NTSLDRFLFD 420
  421 PIKQKQLDWE KRYNIIVGVS RGLLYLHEGS EFPIIHRDLK SSNVLLDEQM LPKISDFGMA 480
  481 RQFDFDNTQA VTRRVVGTYG YMAPEYAMHG RFSVKTDVYS FGVLVLEIIT GKRNSGLGLG 540
  541 EGTDLPTFAW QNWIEGTSME LIDPVLLQTH DKKESMQCLE IALSCVQENP TKRPTMDSVV 600
  601 SMLSSDSESR QLPKPSQPGF FRRSASFSIS LNDVSLTDLS AR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle