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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DNJ29_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.11
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESEENSVL FPIFILTMMA IPLVPYTFVK LSRAFSKKQR SIHCQCLECD RSGKYKRSIS  60
   61 QSISSFTSCS NLTVVLLWIV MIFLIYHTKN MSRESQLFEP FGILGLEPGA SDSEIKKAYR 120
  121 RLSIQYHPDK NPDPEANKYF VESIAKAYQA LTDPLSRENF EKYGHPDGRQ GYTMGIALPQ 180
  181 FILNMNGESG GILLLCTVGL CILLPLVIAS IYLWRSSKYT GNHVKLQTRQ AYFELLQPSL 240
  241 TPSKVMDIFI RAAEYAEISV RKSDDESLQK LFMSVKSELN LDPKKLKQEE AKFWKKHPAT 300
  301 IKTELLIQKQ LTRESSVLSP TLQRDFRHVL EFAPRLLEDL IKMAVIPRNE QGRGWLRPAL 360
  361 GVMELSQCIV QAVPLSARKS SSEDIAPFLQ LPHFNESIAK SIALQVKSFQ KFQELSLAER 420
  421 SKLLREVVSL SETDVQDIEK VLEMIPSLKI NVTCKTEGEE GIQEGDIMTV QAWITLKRPN 480
  481 GLIGAIPHSP YFPFHKEENF WVLLADSNHV WFFQKVKFMD EAGAIAAASN TITETMEPLG 540
  541 ASVKETNDAV KEAVEKVKSG SRLVMGRLLA PGEGTYNLTC FCLSDTWIGC DQKTSLKVEV 600
  601 LKRTRDVEGE NAEEGLEEED DEIEEEDYES EYSEDEEDKK RGSKKKVNKE SSSEESGSDE 660
  661 E

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