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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|913140
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.10
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNVPNYHHS YFFILFIIIL FLAFSVYASN FSATESLTIS SNKTIISPSQ IFELGFFNPD  60
   61 SSSRWYLGIW YKIIPIRTYV WVANRDNPLS SSNGTLKISD NNLVIFDQSD RPVWSTNITG 120
  121 GDVRSPVAAE LLDYGNFVLR DSKNNKPSGF LWQSFDFPTD TLLSDMKMGW DNKSGGFNRI 180
  181 LRSWKTTDDP SSGDFSTKLR TSGFPEFYIY NKESITYRSG PWLGNRFSSV PGMKPVDYID 240
  241 NSFTENNQQV VYSYRVNKTN IYSILSLSST GLLQRLTWME AAQSWKQLWY SPKDLCDNYK 300
  301 ECGNYGYCDA NTSPICNCIK GFEPMNEQAW ALRDDSVGCV RKTKLSCDGR DGFVRLKKMR 360
  361 LPDTTETSVD KGIGLKECEE RCLKGCNCTA FANTDIRNGG SGCVIWSGGL FDIRNYAKGG 420
  421 QDLYVRVAAG DLEDKRIKSK KIIGSSLGVS ILLLLSFIIF HFWKRKQKRS ITIQTPIVDL 480
  481 QVRSQDSLMN ELVKASRSYT SKENKTDYLE LPLMEWKALA MATNNFSTDN KLGQGGFGIV 540
  541 YKGMLLDGKE IAVKRLSKMS SQGTDEFMNE VRLIAKLQHI NLVRLLGCCV DKGEKMLIYE 600
  601 YLENLSLDSH LFDQTRSSNL NWQKRFDIIN GIARGLLYLH QDSRCRIIHR DLKASNVLLD 660
  661 KNMTPKISDF GMARIFGREE TEANTRRVVG TYGYMSPEYA MDGIFSMKSD VFSFGVLLLE 720
  721 IISGKRNKGF YNSNRDLNLL GFVWRHWKEG KELEIVDPIN IDALSSEFPT HEILRCIQIG 780
  781 LLCVQERAED RPVMSSVMVM LGSETTAIPQ PKRPGFCVGR SSLEVDSSSS TQRDDECTVN 840
  841 QVTLSVIDAR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle