YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63003766, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSFQRSAL LVTLSLFFFS IPVSLSVPFV LFHGFGGECS NDKVSNLTQF LINHSGYPGT  60
   61 CVEIGDGVKD SLFMPLRQQA SIACEKIKQM PELSEGYNIV AESQGNLVAR GLIEFCDNAP 120
  121 PVINYVSLGG PHAGVAAIPE GCDSAFCILM KAFFAVIYSD FAQDHTAPSG YVKKPMEIKN 180
  181 YLEHSKYLPK LNNERPGEKN STFKDRFTSL QNLVLIMFQN DTILVPRETS WFGYYPDGAS 240
  241 SSTPVLPPQK TKLYTEDWIG LKTLDDAGKV RFISVPGGHI EITEEDLVKY VVPYLQNESL 300
  301 FSSEHETI

Type	Start	End	Confidence
Signal Peptide	1	26	0.93
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	308	0.99