YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15236046
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRRVSTTSC LSATAFRSFT KWSFKSSQFH GESLDSSVSP LLIPGFHVFH CPDVVGIVAK  60
   61 LSDCIAAKGG NILGYDVLVP ENKNVFYSRS EFIFDPVKWP RRQMDEDFQT IAQKFSALSS 120
  121 VVRVPSLDPK YKIALLLSKQ DHCLVEMLHK WQDGKLPVDI TCVISNHERA PNTHVMRFLQ 180
  181 RHGISYHYLP TTDQNKIEEE ILELVKGTDF LVLARYMQLL SGNFLKGYGK DVINIHHGLL 240
  241 PSFKGRNPVK QAFDAGVKLI GATTHFVTEE LDSGPIIEQM VERVSHRDNL RSFVQKSEDL 300
  301 EKKCLMKAIK SYCELRVLPY GTQRTVVF

Type	Start	End	Confidence
Signal Peptide	1	20	0.82
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	328	0.99