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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10303375
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCTTKNEDNN KVNYLYLIYY NNIPIFKKKS GNEQNISALF ILYDVKKYVY NMVHDHVNTL  60
   61 VLEAFRREDI IKKIKVKEKQ NNNDKNKESN IEKDKNEQTK FTDIYDTNSK SDKDIQKNNM 120
  121 NDGDSNNKNS SLFIDPFESD SYEKNNFSNE KCAFQNVDKS KKDKEHIYSE NITPSSSNNN 180
  181 NDNNKENDCD KEQLDKYNKD KENKLKLNDK DEYISFNFIE DKLTESFHMN QIIHLINKKC 240
  241 VFTKCLENYK NRYFVLKKEE ILKKKKKQKK MSIFSYIVSI ILFFTYIISL INSCLYYIIC 300
  301 TPKLFSEYIF SKKCDGYLQN SAYPKFIFPS EWHNIFRSFM KNKQNPSEYY KYREILLIRI 360
  361 INLIIDIFLG FLIFLLLYFN VINLHYISEK AQIFYGTSTL TSILGTLLQN PLGFKLNNNF 420
  421 TSFIGSILVS ILDKWDLFTN TIPVNNSTVL NFVGYTSLLG FSFFLSFVID YLRFVTAHVT 480
  481 IIYLFLKKIC TLFHKNMYSL YLLFNGKKWN ILKLRVDTNY YSNEEVLLGT ILFTILIFLY 540
  541 PTIFVLVLVF GLIYLIINRI IYLLCVMEKI ILYTPFYIFF IQPNCNKYIS KGFKFTKYEV 600
  601 GEHELLKRYP TNSYLLLEKI HFLFFDKIKL FINIFLYFKN LESMSSYSYI FISFCFCLLK 660
  661 KKYIYIYII

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle