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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MIRO2_ARATH
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLGGKSSAG GRTSLRVAVA GDKGTGKSSL ISAVASETFP DNVPRVLPPI TLPADAFPDY  60
   61 IPITIVDTPS SIDNRIKLIE EFRKADVVLL TYACDQPSTL DRLSSYWLPE LRRLEIKAPV 120
  121 IVVGCKLDLR DERSPARLED IMSPIMKEYR EIETCIECSA LTLIQVPDVF YFASKAVLHP 180
  181 TFPLFDQEKQ CLKPRLRRAV QRIFNLCDHD LDGALNDAEL NDFQVNCFGA PLDPVELMGV 240
  241 KKVVQERQPD GVTDLGLTLP GFLFLFSLFI ERGRPETAWA ILRKCGYNDS LELHAELLPV 300
  301 PAKQSPDQSI ELTNEAMDFL SGIFQLYDLD NDGALQPAEL DDLFQTAPDS PWLEDPYKEA 360
  361 AEKTPGGSLT INGFLSEWAL MTLLDPRKSL ANLTYIGYGH DPASTFSVTR KRSVDRKKQR 420
  421 TERNVFQCFV FGPKKSGKSA LLDSFLGRKF SNSYKATMGE RYAANVIDQP GGSKKTLILR 480
  481 EIPEDRVKKF LTNKESLAAC DVAVVVYDSS DVYSWRKARE ILMEVARRGE ERGYGTPCLL 540
  541 VAAKDDLDPY PMSVQESDRV CMELGIDIPV SLSMKLGEPN SLFSRIVSTA ENPHMSIPET 600
  601 ESGRRSRNIR QLVNSSLLFV SVGTAVGFAG LAAYRAYSAR KNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle