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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18496098
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSRVTVLHI IMAERASTQS HALPASTQAD PSLAASTFKF LVTSDNHLGY QERDSRRGDD  60
   61 SFTTFEECLR AARVEHEVDA ILLAGDFFHD NKPSLGCLAR TSSLLRSYVL GDKPISFTLL 120
  121 SDPKRNFPTH PVPLANFQDP NINVALPIFM IHGNHDDPVG GTSSIDILST AGLVNYFGHT 180
  181 SSLDDIVVEP VLLKKGDTYI ALYGLGNVRD DRLHRCFRMK KLHFVQPKTE PGKDWFKILL 240
  241 FHQNRGVRSG GNMKCGIYET MLAGHGMDLV IWGNEHEQQM EPSPSEGFDI IQPGSTILTS 300
  301 LSEHECNPKK YGVLEVRGGS YRVTGFPLRS IRPVVRRTVE LWRDNPGCRT LDAVEDFLRS 360
  361 VVEQMIEEAE EQVSRIPDDV LKFHPNIKFP IMRLAVDFTD PDSTTFPQPN INRFGQQYMD 420
  421 IVVNPSELLR PIKPKQVPRV ASSASATGGE APVVPVPRLN TSDIRTKVAE VFNANARDAC 480
  481 SLLSESEVSA AVYAFAEKGE RDAIDERICE LLSKCQKSVW VSMRRGESES ILKPESIYEE 540
  541 VVRHKKEANK RYEELSRAAE EALQRSTQGN ELTERLRADT ELAASMDSGN FSRVGGELAD 600
  601 GAALGLLSAT APRRAGGSGA TNNGEGANDA LSQVGFTFPD FSNSLSPPDA SGGAAARGKR 660
  661 SRDELNVFDV ATERDTNEVN SHPNVSTVKG GGKAVKSETS APKPARGRKP KRPVDGGVNG 720
  721 LPLFPSLELT REPVPDENFL LPPVVGGGVK GASTSSSGMP DNY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle