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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7630152
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRDAPAPSS VLRRRTAGSA LGGDTRTQER RRPKPMRKAL RHFPLATGAR RKPLLPPAAS  60
   61 LRTRFTRVQE ASAALGHVLG YLMRQVLSLS VLLDLAQGVL GRLFALLRWL NDYPARVQFR 120
  121 RTTQRFLSVM NTTESYKTFV EAAASLDHYC GVAKWAQDAP PLDRCNAVGL LVDATAAQHL 180
  181 VRTNNLYAME TFLCSLLKRN AHGLMDASIY RYYNSAPHCL EDYTDSIECL ITAYAAGTWH 240
  241 GESAGSDSSS AAADRTLPPV SPAPVLRDLR PCWVRLEASA GAEVRPPLLA GTSPSVSSAT 300
  301 HSLPSAALPA VDVTAKIQQV WQAQLRKTIP TIQAPWATAT AALSRQHSTP ASGHCLVSSA 360
  361 ASAAMPLTDT STGTMPTCAS TMAGDKSILF AGDDAALVPA PVSPAFANPQ TNNDAKAAGD 420
  421 FSSVSLLLSP LLRTEDTTAG NATASLSFGA HISVASPLSA NPMAAARPSP EVALARQLRS 480
  481 SCASLCRFLD GCASPSASPQ QYHAHQRRCS AYHPAVATVG HRLKVLQKVL HSYGRTALVL 540
  541 SGGSSMGTYH AGVARALHEA GVLPDILCGS SAGSIIAAMI CTKSPDELHA FMQSHVLSTE 600
  601 AMHMSPFGED SDLPGKLKRF FKTGFLMDVR SLMGCMRGQC GDMTFLEAYQ LSGKVLNVSV 660
  661 TRSQQEGMPS DRHVLLNYVT APDVVIWSAV SASCALPGLF TAVQLIEKSS LGGGTFAPYL 720
  721 PGELWCDGSI AQDIPRRLLI QLFGVNYLIV SQVNPYVIPF LRPPDSHHIT ATSGSWLARL 780
  781 WFAWVDVCGW VLTVLFSVHL LPRFGRFEML FMLFAQFYSG DLTIQPIDSV MKAVPDYLNL 840
  841 VNNPSADYIS YVASRAQSRT WPLVTRIRLA TCIERCLQRE IRVLEAMEFR EQTT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle