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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42565826
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVARQVFVL LSVLVVCWGF ERCEATGKFG FEVHHIFSDS VKQSLGLGDL VPEQGSLEYF  60
   61 KVLAHRDRLI RGRGLASNND ETPITFDGGN LTVSVKLLGS LYYANVSVGT PPSSFLVALD 120
  121 TGSDLFWLPC NCGTTCIRDL EDIGVPQSVP LNLYTPNAST TSSSIRCSDK RCFGSKKCSS 180
  181 PSSICPYQIS YSNSTGTKGT LLQDVLHLAT EDENLTPVKA NVTLGCGQKQ TGLFQRNNSV 240
  241 NGVLGLGIKG YSVPSLLAKA NITANSFSMC FGRVIGNVGR ISFGDRGYTD QEETPFISVA 300
  301 PSTAYGVNIS GVSVAGDPVD IRLFAKFDTG SSFTHLREPA YGVLTKSFDE LVEDRRRPVD 360
  361 PELPFEFCYD LSPNATTIQF PLVEMTFIGG SKIILNNPFF TARTQEGNVM YCLGVLKSVG 420
  421 LKINVIGQNF VAGYRIVFDR ERMILGWKQS LCFEDESLES TTPPPPEVEA PAPSVSAPPP 480
  481 RSLPPTVSAT PPPINPRNST GNPGTGGAAN LIPLASQLLL LLPLLAFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle