YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AATPC_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSESHLA TAKTALTAVA SVAAAAILAR SVVQDYMPNE VHEYISHGFR RFFSYFSYQM  60
   61 TAVIEEFGGF EHNQVFEAAE AYLSTKISNS TRRIKVNKLE KQSNYSVTVE RDEEVVDIFD 120
  121 GVKLSWILVC RHVDKKDFRN PRDLNSTLKS EVRSYELSFR KKFKNMVLES YLPFVVEQAA 180
  181 SIKQKFKTLK IFTVDSYSVE WTSVTLDHPS TFRTLALDPE VKKNLVEDLD RFVQRKGFYG 240
  241 RVGKAWKRGY LLYGPPGTGK SSLIAAIANH LNFDIYDLDL TSLNNNAELR RLLMSTANRS 300
  301 ILVVEDIDCS IELKDRSTDQ ENNDPLHKTV TLSGLLNFVD GLWSSCGNER IIVFTTNYRE 360
  361 KLDPALLRPG RMDMHIHMSY CTPAAFKVLA SNYLEIQDHI LFEQIEEFIR EIEVTPAEVA 420
  421 EQLMRSDSVD KVLQGLVEFL KAKKQIDNSK A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle