YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|542120, gi\|455618
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAATAPFAL VSRLSQAARL PIRAWRAARP APLWTGRTRP LSVASAAQED RDNSVDVQVS  60
   61 QARNAGNQQG NAVQRRPRRA GFDISPFGLV DPMSPMRTMK QMSDTMDRLF DDAVGFPTAR 120
  121 RSPAAAAGEM PRMPWDIMED DKEVKMRFDM PGLSREEVKV MVEDDALVIR GEHKKEAGEG 180
  181 QGEAAGGGDG WWKERSVSSY DMRLALPDEC DKSQVRAELK NGVLLVSVPK RETERKVIDV 240
  241 QVQ

Type	Start	End	Confidence
Signal Peptide	1	17	0.97
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	243	0.99