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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RBOHJ_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNNKKVGTE DSTKWMLESV EIDPKGDSSV KQPESTINSN NPESSGAGGG ILKNVSKNLA  60
   61 VGSIIRSMSV NKWRKSGNLG SPSTRKSGNL GPPLPVSQVK RPGPQRVERT TSSAARGLQS 120
  121 LRFLDRTVTG RERDSWRSIE NRFNQFAVDG RLPKDKFGVC IGMGDTLEFA AKVYEALGRR 180
  181 RQIKTENGID KEQLKLFWED MIKKDLDCRL QIFFDMCDKD GDGKLTEEEV KEVIVLSASA 240
  241 NRLVNLKKNA ASYASLIMEE LDPNEQGYIE MWQLEVLLTG IVSNADSHKV VRKSQQLTRA 300
  301 MIPKRYRTPT SKYVVVTAEL MYEHWKKIWV VTLWLAVNVV LFMWKYEEFT TSPLYNITGR 360
  361 CLCAAKGTAE ILKLNMALIL VPVLRRTLTF LRSTFLNHLI PFDDNINFHK LIAVAIAVIS 420
  421 LLHTALHMLC NYPRLSSCPY NFYSDYAGNL LGAKQPTYLG LMLTPVSVTG VLMIIFMGIS 480
  481 FTLAMHYFRR NIVKLPIPFN RLAGFNSFWY AHHLLVIAYA LLIIHGYILI IEKPWYQKTT 540
  541 WMYVAIPMVL YASERLFSRV QEHNHRVHII KAIVYSGNVL ALYMTKPQGF KYKSGMYMFV 600
  601 KCPDISKFEW HPFSITSAPG DEYLSVHIRA LGDWTSELRN RFAETCEPHQ KSKPSPNDLI 660
  661 RMETRARGAN PHVEESQALF PRIFIKGPYG APAQSYQKFD ILLLIGLGIG ATPFISILKD 720
  721 MLNNLKPGIP KTGQKYEGSV GGESLGGSSV YGGSSVNGGG SVNGGGSVSG GGRKFPQRAY 780
  781 FYWVTREQAS FEWFKGVMDD IAVYDKTNVI EMHNYLTSMY EAGDARSALI AMVQKLQHAK 840
  841 NGVDIVSESR IRTHFARPNW RKVFSELSNK HETSRIGVFY CGSPTLVRPL KSLCQEFSLE 900
  901 SSTRFTFHKE NF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle