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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME30_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVKVFSFFI LMIIMVIGVS KEYCDDKQSC QNLLLELKAG SSSLSEIRRR DLLIIVLKNS  60
   61 VRRIDMAMIG VMDDTKQHEE MENDMLGVKE DTNLFEEMME SEENSHTWLS SVLTSYITCI 120
  121 DEIGEGAYKR RVEPKLENLI SRARVVLALF ISISLRDNTE LISVIPNGPS WLFHVDKKDL 180
  181 YLNAEIADVV VAKDGTGKYS TVNAAIAAAP QHSQKRFVIY IKTGIYDEIV VIENTKPNLT 240
  241 LIGDGQDLTI ITGNLSASNV RRTYNTATVA SNGNGFIGVD MCFRNTAGPA KGPAVALRVS 300
  301 GDMSVIYRCR VEGYQDALYP HSDRQFYREC FITGTVDFIC GNAVAVFQFC QIVARQPKMG 360
  361 QSNVITAQSR ATKDVKSGFS IQNCNITTSS DLDTATVKTY LGRPWRRFST VAVLQSFIGD 420
  421 LVDPAGWTPW KGETGLSTLH YREYQNRGPG AVTSRRVKWS GFKVMKDPKK ATEFTVAKLL 480
  481 DGETWLKESR IPYESGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle