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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GAUTD_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLHISPSMR SITISSSNEF IDLMKIKVAA RHISYRTLFH TILILAFLLP FVFILTAVVT  60
   61 LEGVNKCSSF DCFGRRLGPR LLGRIDDSEQ RLVRDFYKIL NEVSTQEIPD GLKLPESFSQ 120
  121 LVSDMKNNHY DAKTFALVFR AMVEKFERDL RESKFAELMN KHFAASSIPK GIHCLSLRLT 180
  181 DEYSSNAHAR RQLPSPELLP VLSDNAYHHF VLATDNILAA SVVVSSAVQS SSKPEKIVFH 240
  241 VITDKKTYAG MHSWFALNSV APAIVEVKSV HQFDWLTREN VPVLEAVESH NSIRNYYHGN 300
  301 HIAGANLSET TPRTFASKLQ SRSPKYISLL NHLRIYLPEL FPNLDKVVFL DDDIVIQKDL 360
  361 SPLWDIDLNG KVNGAVETCR GEDVWVMSKR LRNYFNFSHP LIAKHLDPEE CAWAYGMNIF 420
  421 DLRTWRKTNI RETYHSWLKE NLKSNLTMWK LGTLPPALIA FKGHVQPIDS SWHMLGLGYQ 480
  481 SKTNLENAKK AAVIHYNGQS KPWLEIGFEH LRPFWTKYVN YSNDFIKNCH ILE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle