YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FMRF_SEPOF
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCWSPCSLL VVIAIYCLSS HTSEAFDLAQ ACVESQRLSL LPICDTIFAV QQEGAQQSAD  60
   61 DGLRSKRFIR FGRALSGDAF LRFGKNVPDL PFEDKRFLRF GRAAPQLDDL LKQALQRVES 120
  121 LQKSDDTSVR RKRSTDAAPQ SNTDSAEQKN DSAKITKRYV DDVEDSDVKR FMRFGKRFMR 180
  181 FGRNPSDVGS KLTEKRFMRF GRDPEKRFMR FGKSDDKKFM RFGRNPGDAE DELEEDKRFM 240
  241 RFGRGDEEDE EEAEKRFMRF GRDPEKKFMR FGKNGEEKRF MRFGRNPEEP EADKRFMRFG 300
  301 RGGEEDDVNT EEKRFMRFGR SAEKCKGCLE G

Type	Start	End	Confidence
Signal Peptide	1	25	0.97
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	331	0.99