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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115646890, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.62
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAMARCALI PSINPAHSFR HQFPQPNASF YLPPTLPIFS RVRRFGISGG YRRRVITMAA  60
   61 GTDHYSTLNV NRNATLQEIK SSYRKLARKY HPDMNKNPGA EDKFKQISAA YEVLSDEEKR 120
  121 SAYDRFGEAG LEGDFNGSQD TSPGVDPFDL YSAFFGGSDG FFGGMGESGG MGFDFMNKRS 180
  181 LDLDIRYDLR LSFEEAVFGV KREIEVSYLE TCDGCGGTGA KSSNSIKQCS SCDGKGRVMN 240
  241 SQRTPFGIMS QVSTCSKCGG EGKTITDKCR KCIGNGRLRA RKKMDVVVPP GVSDRATMRI 300
  301 QGEGNMDKRS GRAGDLFIVL QVDEKRGIRR EGLNLYSNIN IDFTDAILGA TTKVETVEGS 360
  361 MDLRIPPGTQ PGDTVKLPRK GVPDTDRPSI RGDHCFVVKI SIPKKLSERE RKLVEEFSSL 420
  421 RRSSSSTGPT ETRQEEQSFG SEPRKEPSLW HKMKNFIRPE DSRTKFGTMS LNPSLPLRRM 480
  481 KVSETSIAFS VLALCVITSA VALVQKKGNR LKQKKET

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle