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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15231928
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVDSTDRR DFIVNINGQE SGAVGATGSS SNAEGGNIWK ESSYDFWDGE KGKNDKKGDD  60
   61 EDEDGGSFHF RQRGERRHSS AELSDPPSKL IGQFLHKQRA SGDEISLDVE LNMAELQSNT 120
  121 PPRPATASNT PRRGLTTISE SSSPVKTKVK ADAVRRRQNR TSLGGSSDEE GRNRDEAEVL 180
  181 KCGSKKPMLS RNKTKSRLQD PPTPTHPAID KTEMKSGRRS GIFKSGFLGK SPKAGTPGRN 240
  241 GFEEEEEEDP FLDEDLPEEF KRDKLSFWVF LEWISLVLIV TSLVCSLTIH NLQRKTWWKL 300
  301 DLWKWEVTVL VLICGRLVSS WIVRIIVFLV EKNFTWRKRV LYFVYGVRKS VQNCLWLGLV 360
  361 LLAWHFLFDK KVERETRSTA LRYVTRVLVC LLVALIIWLV KTILVKVLAS SFHMSTYFDR 420
  421 IQESLFTQYV IETLSGPPLM EIQRMEEEEQ QVAEDVKSLE KLAGAKLPPA LKATVKSFMK 480
  481 VGKSPGLNRI GSKRGEDGEG IRIDQLKRMN TKNVSAWNMK RLMNIILKGA ISTLDQNMQD 540
  541 TTQEDEDATH IRSEYEAKCA ARKIFHNVTE PGSRYIYLED FLRFLCEEEA ERAMALFEGA 600
  601 SESDKISKSC LKNWVVKAFR ERRALALTLN DTKTAVDRLH RIINVLLLVA FVFGNSCKTI 660
  661 FEAIIFLFVM HPFDVGDRCE IDGVQLVVEE MNILTTVFLR YDNQKIIYPN SVLGTKPIAN 720
  721 YYRSPDMGDA VEFCVHIATP PEKITAIKQR ILSYVDNKKD YWYPAPMIVF LSMDDLNSVK 780
  781 IAVWLTHRMN HQDMGERYIR RGLLLEEVGK TCRELDIEYR LYPLNINVRS LPPTANPTSS 840
  841 DRIPPSWMQQ RGP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle