YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22325571
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWAPDIYEGS PTPVTAFLSI APKISISANI LRVSIYGSYG ATLQQIFFFC SIASMILGAL  60
   61 AAMAQTKVKR PLAHSSIGHV GYIRTGFSCG TIEGIQSLLI GIFIYALMTM DAFAIVSALR 120
  121 QTRVKYIADL GALAKTNPIS AITFSITMFS YAGIPPLAGF CSKFYLFFAA LGCGAYFLAP 180
  181 VGVVTSVIGR WAAGRLPRIS KFGGPKAVLR APDT

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.47
Transmembrane Helix	14	33	0.52
Cytoplasmic	34	42	0.49
Transmembrane Helix	43	64	0.89
Non-Cytoplasmic	65	96	0.62
Transmembrane Helix	97	119	0.84
Cytoplasmic	120	135	0.82
Transmembrane Helix	136	158	0.81
Non-Cytoplasmic	159	165	0.78
Transmembrane Helix	166	189	0.91
Cytoplasmic	190	214	0.91