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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12055236
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTSFKMAAL LFVLWSALFL TGATALNECD SNPCMNSAIC RDGLIGAYTC ECVGNWQGVN  60
   61 CQTPFTAVAC PFGNVYDYVA TISIGPPLPH RYLCQAVFRF HGAIQVNFTF TRFDIEASKD 120
  121 GIWLLPGNVV DSSDDALSYH NGTASLPPSV ITYTSEDFAF NPNFFIEVFT DKTILSQGFT 180
  181 LDISVDGDDC LSSPCQNGAL CVDLIRDYFC ICGAGYEGVN CENDTDECRS DPCMNGGVCV 240
  241 DGENSVTCTC TQSYTGVLCE TGIVIVASTS VSVGNGVYEG SFTPDVNFDF TFSPALFATY 300
  301 SIGGSGTSQL WLINTFFTSD PSTSAMTAFQ TITLSALQET ALWSPPSTTS ISNLLSSQIN 360
  361 VPGGVVCSDI QFFCVRIGRN PASSPFFEIR GEPTDDVLEE CVSIACRGVE ITDTTLMISS 420
  421 GDLRTGESGQ TVTFDVLLDS DANAGSVTGS NLWSIAAFGS SNNLGAGTRV RETNVILDGT 480
  481 QGGVGITAGS QSTISALSFD VNLGNGFATC DDYPFICVEV SKNSIAAPNY GLSGDLISCQ 540
  541 AVTCRGVEVT NTVVSVSTGA LLEETNQDIS FDVTLTSSAE GGSAQGSNLW GILAFASSKS 600
  601 DGSGTRLEET IVTLDPAQSG TALLSGTTET ISGVTTSWQL NDGPTCSQIT HFCVQVRKGS 660
  661 NPDFELNGVP TNDVLIACTP ISCRGVEITS TSVVVNSGDV LEGTAQTLNL DITLQSVAGA 720
  721 GSVSGSGLIN VISFLSAASD GSGSRFDTST STISTTHGFT GIDAGGPTVV SGLAVAVSLV 780
  781 DGPTCSDFGY VCVEVQRGTS PSIDYTLTGI PSQASLIGCR QVTCRGVEIT GTELSLTSGD 840
  841 IREGTSQTIN FGVTLNSAAL AGSVSGSNLW QITPFLSSTP DASGNVQTFA NAVLAVNQGN 900
  901 RPVVAGSPTT IGGVSIPANL TSGPQCAQFA YFCVSVSRNP LANPQFLLSG VPNVDSLTTC 960
  961 EPINCRGVEV SQTVVAINGG EIIEGVMSSL TFTVALQTMS TGGNVAGTNL WEVSAFGSSN1020
 1021 MDGSGTRYLL TPANLPDSAA DAGVTAGSVT SLAGLTADFT LSASVTCAEF QFLCVQVTRD1080
 1081 TGSTPSFSLS GVPSDSSLIS CTSTPCGGVE ITGTELMIQS GLLREGFPSS QFGFSVSISS1140
 1141 NPSGGSVSGS NLWDITTWLS SDALGAGTKY LEETLSLTAQ QSGTPIVSGV DTATINGLLV1200
 1201 DWDSTSGPLC TQATFMCTQV SKSISANPDF QLTGTPNNDV FINCQPIACR AVEVTSTALD1260
 1261 LASTSILEGA SQTLSFSFTI NTDPSAGGVS GSNLWDLAIF LSDSASGSNS INERDILLST1320
 1321 AQRDSEIQPG TPTVIDGLSA MLNLQTAPTC SEFSHVCVRL TKSGAANPNF GISGIPDTSA1380
 1381 LIGCEAVTCT GVIISGTSLD LNSGDIQEGT NQQVEFDFNL VSVSTGGSVS GSNLWQVTVF1440
 1441 GSLDSNGQGN RVEPQTVALT STQGATAISA GTPAVLSGLN FNWDLTDGPL CADFDYLCAQ1500
 1501 VERNPSSSLD FMLSGNPSDS VLTTCLPVTC RGVEITRTIV TVPSPEILEG TNQNLDLTVT1560
 1561 LESNNMGGSV NGDNLWQAIA FLSANADGSG TRLEQTNIPL DTSQAGLDIT AGNAVQLTSL1620
 1621 AYALDLVGGV TCSDFQYLCV QVAQNPLSTP AFQLDSTADE LTACMQVTCR GVEIANTDLT1680
 1681 LISGGVREGV VRQTLTLDLT FQSNDQAGSV SGTNLWEFEV FGSMNADGSG ARVAQTISPT1740
 1741 TIHYNTPLIA GSDTIFNGIN IGWDMISGQT CDDVQYICVE ASKNLFANPD FTLVVSNNAD1800
 1801 LRACLPLDCR GVEVTGTGLD VTSGGVLVEG DSEHSITFNI AVDSNADGGS VAGTNLWLVR1860
 1861 AYATDSMGLG GSVFNPVDVT LTPAQSGTGI NAGTTANILS VTADLDLSSR LCSELEGICV1920
 1921 VLQQNANSNA PFNFDPQPNS NVLTSCSPAT CTGVEVTDVN FNVVSGAPLQ AGSENNSLTL1980
 1981 NLNINPDATG ASVSGTNLWQ VEIFLNFQMD GQGTTSFPPG YQVTAIPASS NSQPLTAGLS2040
 2041 YSLDQITTVL NLRNRECASL PFVCMRLSKN PSFSPDFTLS DSSSPISCQQ LPCADTDECD2100
 2101 PNPCLNGGIC TDGVNSYTCS CPPGFTGTNC MDDINECDSD PCQNGGSCME GVDSFTCICA2160
 2161 AGYTGTFCPD DINECASGPC QNGGICDNGL AMYTCDCQPG YTGINCEMNI DECASSPCEK2220
 2221 GGTCNDRINE YLCDCLPGYA GDQCQIDINE CLSFPCRNGG DCMDLVADFL CICEPGWTGR2280
 2281 ICDTDVNECL SSPCVNGDCI HGINSYFCTC QAGWTDINCD IDIDECASDP CFNGGVCVDE2340
 2341 VNGYTCNCAP GWTDVNCQTD INECLLTASP CNGNDVCQNL QNSFSCDCSP GWTGDRCGTD2400
 2401 INECASDPCI NGGTCNDEIN QFTCTCLEGF TGVRCDIEID ECTSQPCQNG GTCQDGNNAF2460
 2461 TCQCAPGWEG DTCTEDVNEC ASSPCVNGGT CTHGIDIYFC ECPPAWTGYN CEQDRMECLS2520
 2521 NPCLNGGRCI EQTNAYECVC EPGYTGTNCE TDINECASGP CENAGDCIDE VNSYTCDCTA2580
 2581 GYEGLVCQFE INECESSPCL NGGTCDDQIA LYVCTCAPGW TGSNCEIGNC HFIKDRQTLN2640
 2641 ARGRCLRFFF AVRLIN

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