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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PUB63_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHLRRRRFK LSLCALPVSI DRLLNFPAEK QMSVNDSIDP RFVFHVEDES LRFRVGDSGT  60
   61 KIRELETVGD RHFRTQQGFC GNRIEKDETM YSDGDDEEYD VSIRRRTALI QPGIDSGNNY 120
  121 DSAAAEETNR ESKNPVGWEL VVREDGEGNS TIDRHEMEFK VRITKPDGNV SNSHRNTQQK 180
  181 RDFASVEKER VTTTSVSSWE SLKAILSDPV TGALMNDATI LPCGHSFGAG GLKEVKKMKA 240
  241 CFTCSQPTLE GSEKPNLSLR IVVHAFRQEE DSDHIHTLKR RKERSDQKRS FCIPNITETP 300
  301 KSSRGIQFPF SIGDHIIIEG NKRTPPRFVG RIAVIMTQCL NGWYVVKTVD NSESIKLQHC 360
  361 SLAKISDNSS TKVTVAEMPP SWL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle