YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6018896
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.69
Topology Confidence: 0.19
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKAAKIPLF FALLGAVCIQ AVVVGPQPLH NNNRNGYRYN GPAHKYLPSE ESHSHGSPLD  60
   61 SSHQHDQQGP SNAYNSHHYP AQEQHGQGAP EHDHQQKEVD SWQTALSQQQ HESFGNQQNH 120
  121 QNAYNEGPVY QHYQGFNHQQ HYGLSQQQQH ESYGQEHYQQ SPNQLQHHQS QHANEYAYEP 180
  181 AHFQQQQQHH EIQGHKQHQQ RKEHWNFVQE QQPQNHEPWQ SSHGFQQHQQ QHSNRFESQL 240
  241 PLREDLWQPI RELDLEKLPS AEAHASSHKT VAAPGRDVKL VPSYTLSSDF EHDRFIGLDS 300
  301 TDTRLLTQSL PDAYRKQLFS SPPEPSSLAQ GHNQQHKPGS AAYGGSHGPS LGESTSDFLQ 360
  361 MQSHSYQLPS TFTTHTEWTQ DKEQHQHNPQ QQATGNRQYS ASAFAVSPSY LHASEASQPP 420
  421 KNSLPHPSPE PQVSNDIGVA SYICPKRQGH CKHLQQTTIL SSMFRFFHLD ILVSLISLIS 480
  481 CFALMNAQQQ QQFHQQEVSG IQLHPPWLYS MPWRPLILPT ASPSLPSLTA LAQLSPGYTG 540
  541 PQTFPPVPQD QRQQTQQYQQ HQQQQFQQAY PQQYQQQRYQ QEYPQQYQQP SVLVGLFTPQ 600
  601 LQAQPLSAPP PQAGHFSLPF RPSPFAGYTD DGDEHIAQGQ GNGMPEQTSQ RTLEEPTFHE 660
  661 HVYNNKPVAE GSQHPRGYVY LSPSNAYNLV RT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle